The UE Graduate School has seven accredited programs: Master in Education, Level II; and Doctor of Education, Doctor of Business Administration, Master of Arts in Education, Master of Library and Information Sciences, Master in Public Administration, and Master of Business Administration, all Level II Reaccredited (all effective December 2016 to November 2019). Two other GS programs, Master of Science in Construction Management and Master in Information Management, are on Candidate Status (May 2016 to May 2018).

The UE College of Dentistry‘s Doctor of Dentistry program is
Level II Reaccredited Status (valid up to 2020).

The UE College of Arts and Sciences-Manila has five accredited programs: Liberal Arts, Level IV Reaccredited (effective October 2015 to October 2020); Bachelor of Science (BS) in Mathematics, Level III Reaccredited (April 2017 to April 2020); BS Biology, Level III Re-accredited (April 2017 to April 2020); BS Psychology, Level III Reaccredited (April 2017 to April 2020); and BS Hotel and Restaurant Management, Level II Reaccredited (September 2015 to May 2020). Four other CAS Manila programs are on Candidate Status: Bachelor of Arts (AB) in Broadcasting, AB Journalism, Bachelor of Library and Information Science, and BS Tourism Management.

The UE College of Business Administration-Manila has two accredited programs: the Bachelor of Science in Business Administration (BSBA) program, Level IV Reaccredited (October 2015 to October 2020) and BS Accountancy, Level II Reaccredited (July 2016 to May 2021). CBA Manila’s BS Accounting Technology program, meanwhile, is on Candidate status.

The UE College of Computer Studies and Systems, which is certified by the Commission on Higher Education as a Center of Excellence in Information Technology Education, has two accredited programs: BS Computer Science, Level III Reaccredited (April 2013 to January 2017, but already visited for possible Level IV accreditation in November 2016) and BS Information Technology, Level II Reaccredited (July 2016 to May 2021). The CCSS’ BS Information Systems program, meanwhile, is on Candidate Status.

As of August 2023, the programs of UE College of Education-Manila have the following PAASCU accreditation status: Level III Re-Accredited Status 1. Bachelor of Elementary Education 2. Bachelor of Secondary Education 3. Bachelor of Physical Education 4. Bachelor of Special Needs Education Level II Re-Accredited Status 1. Bachelor of Science in Nutrition and Dietetics 2. Basic Education (K-10) Candidate Status 1. Senior High School

Two of the UE College of Engineering-Manila‘s programs are accredited: BS Civil Engineering, Level II Reaccredited (September 2015 to May 2020) and BS Electrical Engineering, Level I Accredited (September 2015 to September 2018). Meanwhile, CEng’g Manila’s BS Mechanical Engineering and BS Computer Engineering programs are on Candidate Status.